Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNKGMISDTILHFSSSIVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNVRYSHWLRFVWPVVAFVLIFGGGLLITQVLIYS |
| 1LGH Chain:B ((13-32)) | ---------------------------------AIAVHDQFKTTFSAFIILAA--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -397 for 73 contacts (-5.4/contact) +
2D Compatibility (PS) -1842 + (NN) 1344 + (LL) 15416
1D Compatibility (HY) -400 + (ID) 150
Total energy: 13971.0 ( 191.38 by residue)
QMean score : -0.194
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