Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIVLFLIVFILLSLIVSRYLYSVALNVPSKIDVVFNPIEKLIYQLIGTKLEHMSGKTYIKHFLLFNGLMGGLSFVLLLIQQWLFLNPNHNLNQSVSLAFNTMASFLTNTNLQHYAGETDLSYLTQMCVITFLMFTSAASGYAVCIAMLRRLTGMTDVIGNFYQDITRFIVRVLIPFALIISLFLISQGTPQTLKGNLVIETLSGVKQTIAYGPMASLESIKHLGTNGGGFLGANSSTPFENPTYWSNYAEALSMMLIPGSLVFLFGRMLKTKLQIHPHAIMIFVAMFVMFIGFLVTCLYFEFAGNPV--LHHLGIAGGNMEGKETRFGIGLSALFTTITTAFTTGTVNNMHDSLTPLGGMVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGKTPSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAFIVPGASDALTNPQFHGVSQVLYEFTSSSANNGSGFEGLGDNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKKTYQQHTQDVPINNLFFSSVLIIFIILLS---GLTF-LP-------DLMLGPIGEQLLLHA- |
| 4J0D Chain:A ((22-491)) | --------------SMSNRLIFDADWLVPEQVQVAGQAIQYYAAR----------NIQYVQH-----PVAAIQVLNVFVPAAYLHGSSVNGYQRA------TAPILMPNTVGGYLPGPADDPQRVTWPTNAGTIQQALKRGYVVVAAGIRGRTT-VDKSGQRVGQAPAFIVDMKAAIRYVKY-------NQGRLPGD--------------------ANRIITNGTSAGGATSALAGASGNS----AYFEPALTALGAAPATDDIFAVSAYCPIHNLEHADMAYEWQFN---GINDWHRYQPVAGTTKNGRPKFEPVSGQLTVEEQALSLALKAQFSTYLNQLKLTASDGTHLTLNEAG-------------MGSFRDVVRQLLISSAQTAFDQGTDIHK---YAGFVVTGNQVTDLDLSAYLKSLT-RMKAVPAFDQLDLTSPENNL-FGDATAKAKHFTALAQTRSTVTAQLAD------------AELIQAINPLSYLTTTSSQVAKHWRIRHG--AADRDTSFAIPIILAIMLENHGYGIDFALPWDIPHSGDYDLGDLFSWIDGLCQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -399844 for 4013 contacts (-99.6/contact) +
2D Compatibility (PS) -45994 + (NN) 9141 + (LL) 9708
1D Compatibility (HY) 4400 + (ID) 4550
Total energy: -427139.0 ( -106.44 by residue)
QMean score : 0.160
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