Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSDFSSLLLDIIELIQSHIIIVNKNDHSLIYLNEMSESLLLYVYSVLINVTSINKLFLYEETNTVFRCITSSINENMDCIINHSPNELLMFLYDLEQRFNNFINRLNLKEPKNRHTYPTLNSVYIELNPLQLSEDTYFSSINVAELINRQSIRKNLFK |
3VVH Chain:A ((249-289)) | ------------------------------------------------------------------------AIFELLDYIVNEPPPKLPSGVFSLE--FQDFVNKCLIKNPAER-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4827 for 176 contacts (27.4/contact) +
2D Compatibility (PS) -4148 + (NN) 1179 + (LL) 9788
1D Compatibility (HY) -4400 + (ID) 750
Total energy: 6496.0 ( 36.91 by residue)
QMean score : 0.049
|
|
|