Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MICSQTLFRYPTHMIFLMKHNYMIDCIILLNNLLQTCHFTLKIYIISDDILQVIYK-----
2B9K Chain:A ((1-47))
---AIKLVQSP---------NGNFAASFVLDG--TKWIFKSKYYDSSKGYWVGIYEVWDRK
General information:
TITO was launched using:
RESULT:
Template:
2B9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22131 for 206 contacts (-107.4/contact) +
2D Compatibility (PS) -4968 + (NN) -1705 + (LL) 1952
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -29352.0 ( -142.49 by residue)
QMean score : -0.168
(partial model without unconserved sides chains):
PDB file :
Tito_2B9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B9K-query.scw
PDB file :
Tito_Scwrl_2B9K.pdb
: