Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDADNFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQHHHQLNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ |
1QTX Chain:B ((1-19)) | ---------------------------------------------------------------------------RRKWQKTGHAVRAIGRLSSS-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1946 for 69 contacts (28.2/contact) +
2D Compatibility (PS) -1871 + (NN) 1673 + (LL) 14196
1D Compatibility (HY) 0 + (ID) 250
Total energy: 15694.0 ( 227.45 by residue)
QMean score : -0.037
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