Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNKNIVLLKDLIETIHHKYPQT----VRALNNLKKQGYLIKERSTEDERKILIHMDDAQQ----DHAEQLLAQVNQLLADKDHLHLVFE |
| 3F3X Chain:A ((25-130)) | -------------------------------------------------------------------------------------------------------------------------------------------------FNNRLGKLMNLSYLDFSILKATSEEPRSMVYL-------ANRYFVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLLEANEVLRNLVNEMLSDVENVEELLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45068 for 623 contacts (-72.3/contact) +
2D Compatibility (PS) -10535 + (NN) -8970 + (LL) 13932
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -60691.0 ( -97.42 by residue)
QMean score : 0.499
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