Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMAS-LQNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVI---GFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSAILQG-LATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK |
3WDO Chain:A ((7-382)) | -----GERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASE-----ALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGA-IAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIAL-TIWVVPNSSTHVLNRES--GMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADA-GF---PAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQV--FVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAV--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -324358 for 3243 contacts (-100.0/contact) +
2D Compatibility (PS) -37440 + (NN) -2969 + (LL) 3760
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -379757.0 ( -117.10 by residue)
QMean score : 0.273
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