Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISILGRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMME-HPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKGHVSKKD |
4C1W Chain:A ((4-86)) | ----------------------------------------------------------------------------------------------------------------------------VIEKEDVETNASNGQRVDLSSELDKLKKLENATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNNT-ATLEGRGSDGKQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28159 for 392 contacts (71.8/contact) +
2D Compatibility (PS) -8177 + (NN) 3588 + (LL) 13812
1D Compatibility (HY) -400 + (ID) 1150
Total energy: 35832.0 ( 91.41 by residue)
QMean score : 0.313
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