Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYPIKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFI-GPRPERPEFVELFSSEVIGFEQR-CLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR |
2ZVI Chain:A ((89-139)) | ------------------------------------------------------------------------------------------------------------------------------------QDIPALLTTVFGKLSLDGKIKLIDLHFSEA-------FKRALPGPKFGVYGIRKLLGE------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1216 for 199 contacts (6.1/contact) +
2D Compatibility (PS) -5390 + (NN) -2023 + (LL) 14400
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 6053.0 ( 30.42 by residue)
QMean score : -0.028
|
|
|