Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVSFSFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLFLALTVFAMYMVVITIFIDDYYLIFLLQGIYIIGAALDISWFYAGTEKFKIPSLSNIVASGIVLSVVVIFVKDQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPNGQLNLYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIMINTFDLVMIPRITKMSIQQSHSLTKTLANNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLIIPLNMLISRQYLLIVNKIRLYNASITIGAVMNLVLCLVLIYFYGI-YGAAIARLITEFILLIWRFVDITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIVVYLLLMMTMKNQYVWQILRHLRHKTI |
4TXD Chain:A ((21-369)) | -KRDVLAE----------------------------------------------------LGLGDLRPYLRSIGDKDRIFPK----------------AHRIEVVFLVRAANYLLLRTEG--------------AGT-----INMTTLEYSGGAMEVPVIQ----------PQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEV-----IGKAKDLGFKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHNEKFGGLSIGIKTRVRFDPAFATQRRITPETHNKVTEGHLSMTGQALFSEVHVEPG--TVFIGRAELVDLTEPELVATLYSLATLRELGGRSG--IYGTVRVEILGVKAGKYASTTAYDLAAENAGKGYEEVKKNLKERLEKLGFTPVDNSKLLAA----------------------VDHKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -414057 for 2771 contacts (-149.4/contact) +
2D Compatibility (PS) -35701 + (NN) -7247 + (LL) 14256
1D Compatibility (HY) 3200 + (ID) 3250
Total energy: -442799.0 ( -159.80 by residue)
QMean score : 0.135
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