Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCASNIVHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGI-------------------------GQIPGILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAG--G-------------IGLFYDQTLG----LFQYPKTATIILFTLVIVVVIDYISTKVRAHLA |
| 3RLF Chain:F ((275-503)) | --------------------------------------------------------------------KPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWE---ALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146916 for 1234 contacts (-119.1/contact) +
2D Compatibility (PS) -18806 + (NN) 736 + (LL) 6884
1D Compatibility (HY) -15200 + (ID) 1450
Total energy: -174752.0 ( -141.61 by residue)
QMean score : 0.211
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