Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
2QN6 Chain:B ((43-84)) | ---------------------------------------------------------------------------------------------------------NIKIYT-IGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEE-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2936 for 191 contacts (-15.4/contact) +
2D Compatibility (PS) -4614 + (NN) -1649 + (LL) 15016
1D Compatibility (HY) 0 + (ID) 200
Total energy: 5617.0 ( 29.41 by residue)
QMean score : 0.535
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