Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
2ZVI Chain:A ((89-105)) | ----------------------------------------------------------------------------------------QDIPALLTTVFGKLSLD-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 714 for 65 contacts (11.0/contact) +
2D Compatibility (PS) -1677 + (NN) -215 + (LL) 12280
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 9252.0 ( 142.34 by residue)
QMean score : 0.112
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