Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
1PG5 Chain:B ((112-125))
----KGILKCPNPYCITS---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2926 for 45 contacts (-65.0/contact) +
2D Compatibility (PS) -1401 + (NN) -1309 + (LL) 2444
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -4642.0 ( -103.16 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1PG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PG5-query.scw
PDB file :
Tito_Scwrl_1PG5.pdb
: