Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE |
1UMQ Chain:A ((49-75)) | -----------------------------------------------------------------------------------------------------------------------------------------------IYEMCDRNVSETARRLNMHRRTLQRIL----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12753 for 156 contacts (-81.8/contact) +
2D Compatibility (PS) -2765 + (NN) -1020 + (LL) 20616
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 2628.0 ( 16.85 by residue)
QMean score : 0.553
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