Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQ-ELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAIGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPYQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN |
1Q3M Chain:A ((16-49)) | ----------------------------------LPKRVCLNPDCDELADHIGFQEAYRRFYGPV---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3548 for 161 contacts (22.0/contact) +
2D Compatibility (PS) -3063 + (NN) -2795 + (LL) 13076
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 9166.0 ( 56.93 by residue)
QMean score : 0.120
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