Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAELSGVKLGDPIPHHHNDSEKMDYKSYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLMVAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGGIIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPT-----------IALLIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGVTLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLAAYAGGFVCTYLFGTTKAMRQTDLLGD |
| 3DIN Chain:C ((248-390)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSI---------PSAIASITNNETLKNLFRAGGFLYLLIYGLL-VFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRS----TEQYLHRV-----LNRVTFIGAVFLVVIALLPYLVQGAIKVNVWI------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92791 for 754 contacts (-123.1/contact) +
2D Compatibility (PS) -13409 + (NN) -41 + (LL) 21548
1D Compatibility (HY) -11200 + (ID) 2050
Total energy: -97943.0 ( -129.90 by residue)
QMean score : -0.065
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