Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLITYQIILFFIISLSYYLTLNHYMAVTVGNFTSIFGMFAAILFMYYYLLYKSPEYNQRKRFKHFIHITNLIIIAFSTFVLVHLALKLFFSI
2JY0 Chain:A ((1-27))
---------------------MDREMAASAGG----------AVFVGLVLLTLSPHYK-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4180 for 94 contacts (-44.5/contact) +
2D Compatibility (PS) -2851 + (NN) -1892 + (LL) 7960
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -3013.0 ( -32.05 by residue)
QMean score : -0.247
(partial model without unconserved sides chains):
PDB file :
Tito_2JY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JY0-query.scw
PDB file :
Tito_Scwrl_2JY0.pdb
: