Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQI---------KIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ
2WBX Chain:A ((1-102))
-----------------------------MQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPL---DRETKSEFTVEFS-VSDHQGVITRKVNIQVGD-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84182 for 622 contacts (-135.3/contact) +
2D Compatibility (PS) -10385 + (NN) -2919 + (LL) 10072
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -91214.0 ( -146.65 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_2WBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WBX-query.scw
PDB file :
Tito_Scwrl_2WBX.pdb
: