Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNTFLICDECQAVNIRTLQKKLEKLDPDAEIVIGCQSYCGPGRRKTFTFVNNRPLAALTEEELI-EKVSQQLKKPRDPEEEERLRKRHEERKRRKEEQDRKLKEKLEKRKAQQ
1O87 Chain:A ((122-177))
--------------------------------------YKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKAR--------------------
General information:
TITO was launched using:
RESULT:
Template:
1O87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12418 for 282 contacts (44.0/contact) +
2D Compatibility (PS) -6200 + (NN) -5802 + (LL) 4984
1D Compatibility (HY) -800 + (ID) 950
Total energy: 3650.0 ( 12.94 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1O87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O87-query.scw
PDB file :
Tito_Scwrl_1O87.pdb
: