Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQ------LFLVVEEGNDIVGFANF-IYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVY---LEVDNKNEEAVAYYKEQGFTILRSYQPEMYGEKLDLALMYKAF
3FIX Chain:A ((29-169))
---IRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIELKIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKK--GILECRLYVHRQNSVGFSFYYKNGFKV----------------------
General information:
TITO was launched using:
RESULT:
Template:
3FIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63260 for 893 contacts (-70.8/contact) +
2D Compatibility (PS) -14104 + (NN) -3640 + (LL) 2596
1D Compatibility (HY) -12400 + (ID) 1750
Total energy: -92558.0 ( -103.65 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3FIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FIX-query.scw
PDB file :
Tito_Scwrl_3FIX.pdb
: