Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRLKFQVDKDLLLAIVVGVCGSLVALAMFFLSGYMVTQSALGAPLYALMILVVTVKLFGFLRAITRYVERLISHKATFTMLRDIRVQFFGKLVNVIPNVYRKLSSSDLISRMISRVEALQNIYLRVYYPPVVIGLTALVTVIVLAF-ISIGHALLIMVSMLFTLLIVPWLSSKKARTLKKHAA---------NEQARFLNHFYDYKAGMDELRRFNQINHYRDNLMAKLNHFDKLQLKEQRFLTIYDFILNII-----AMLSIFGSLVLGLIQINAGQLNIIYMTSIVLMILTLFEQAVPMTNVAYYKADTDQALHDINEVISVPSTNGKKRLNDKYDATNIYEVK-DASFK----YWNQQTYVLSDINFNVNRGEKIAIVGPSGSGKSTLLQIMAGLYQLDSGSVRFENMDMFEIDDKDKFESLNVLLQSQQLFDGTIRQNL------FTDEK-DEAVQAIFKQLDLEHL--ALERQIDLDGHTLSGGEIQRLAITRMLLKDTASTWILDEPTTALD--KQNSLKVMDLIEAHAETLIVATHDLTLLSRFETIIVMINGKIVEKGNYQQLLANQGALWNMIQYNA |
| 4Q4H Chain:B ((112-586)) | -------------------------------------------------------------------------------------LRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNV-LGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNE----------SLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFG----GWLALK----DIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEK---DDPDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLAN-PKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYEL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -185502 for 3123 contacts (-59.4/contact) +
2D Compatibility (PS) -46136 + (NN) -4070 + (LL) 11200
1D Compatibility (HY) -32000 + (ID) 6050
Total energy: -262558.0 ( -84.07 by residue)
QMean score : 0.353
|
|
|