Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNA-AIDAGYRAFDTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWPCEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIKPMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK
1VBJ Chain:A ((14-275))-------LSNGVMMPVLGFGMWKLQDGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASCGVPREELFVTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPGKDK--FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQGH-LVEDARLKAIGGKYGKTAAQVMLRWEIQAGVITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHRYGPDPE--------


General information:
TITO was launched using:
RESULT:

Template: 1VBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123835 for 2252 contacts (-55.0/contact) +
2D Compatibility (PS) -28581 + (NN) -16208 + (LL) 1144
1D Compatibility (HY) -24800 + (ID) 6200
Total energy: -198480.0 ( -88.13 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_1VBJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VBJ-query.scw
PDB file : Tito_Scwrl_1VBJ.pdb: