Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
2WWB Chain:B ((27-57))
---------------------------KPDRKEFQKIAMATAIGFAIMGFIGFFVKLI----
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4777 for 128 contacts (-37.3/contact) +
2D Compatibility (PS) -3214 + (NN) -121 + (LL) 4364
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -6398.0 ( -49.98 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: