Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSP-KCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNND--KSINSELINFIINYARQ-NNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
3FBU Chain:A ((8-167))
-LLIRKFEFKDWEAVHEYTSDSD--VMKYIPE-GVFTEEDTRNFVNKNMGAKNFPVILIGENILVGHIVFHKYFG---EHTYEIG-WVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYFKKCIPHGNEWWDEYYYAILEE--
General information:
TITO was launched using:
RESULT:
Template:
3FBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93654 for 1112 contacts (-84.2/contact) +
2D Compatibility (PS) -16059 + (NN) -266 + (LL) 548
1D Compatibility (HY) -6800 + (ID) 1150
Total energy: -117381.0 ( -105.56 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_3FBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBU-query.scw
PDB file :
Tito_Scwrl_3FBU.pdb
: