Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAENDIVKENPDVEI-FEEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
3GZM Chain:A ((6-78))
--TFDDIKKIISKQLSVEEDKIQMNSNFTKDLG-ADSLDLVELIMALEEKFNVTISDQDALK--INTVQDAIDYIEKN-
General information:
TITO was launched using:
RESULT:
Template:
3GZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29679 for 484 contacts (-61.3/contact) +
2D Compatibility (PS) -7525 + (NN) -3049 + (LL) 644
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -41359.0 ( -85.45 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3GZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZM-query.scw
PDB file :
Tito_Scwrl_3GZM.pdb
: