Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWFKLILDVTTFILIAILLFVYTYKENEEILPDTKYPIAVTDWNKKYSKNEIYKRINQFAKNENVAIYKSTSNYTNKNVDKDIYVFNKSK-ATTITPFNAKYNIHYLSDDELLKKDIKGSYFVKDKNFDVSKFINFLKEYGVTAESYKIDHMMIAVGVIKQMNIEVPLSALLIVYFIYYIFEKNINFKAYAI-KYLNGFTLRKIIFENFSKKCTYWVTLIISQIL------LTTSVLWILNYTGNLDLFILRLVLLSCLFILTISVINLWTFLMLLNLNI--ANMIKGKQHFKTIRFINTVCKSILLVLIASVMIEN--------TSVIKDLNKIKETEKYWNVLDDYYTIEFAPYHETKQSLIDNMLRSEQLVKASEAENNA-------ILFKPKGDSVDNDNFSPDEGNVILVNNQFWSIYYKQFQPDIPIKNQKNNVEVIIPQKFHAMRNEINQAYHSWFEFVQNKNNKENKLSIQFINKNDYRIFSFDARDSRHLSFIEAPIIVNVQASDLSNDFYYAMI------SQGGYLFKNYDALVKNIENYHL---DGEISGITNYKDSVMEMYHENNLKLTVLNFSQIIIAIILIIIILFDVK---YYFEQHRKLLVIKKLYGYSTLRANYQYLLINNIV----------VVFIGILTNVILHSQYIMMIFATILVVQILLQICSLYYHGRRFNEVIKEF |
| 1MIU Chain:A ((22-726)) | ---KDLMSSLQSARDLQDMRIKNKERRHLRLQPGSLYLTKSSTLPRISLQAAVGDRAPSACSP------------------KQLYIYGVSKECINVNSKNAEYF-QFDIQDHFGKE-----DLCAGKGFQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISSIWVANHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSRRSALKKILERDDTAAKTLVLCISDIVDTIELTDGWYAVRAQLDPPLMALVKSGKLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSRLGFFRDPRPFPLPLSSLFSDGGNVGCVDIIVQRVYPLQWVEKTVSGLYIFRSEREEEKEALRFAEAQQKKLEALFTKVHTEFKSRTLTRQQVHALQDGAELYAAVQYASDPDHLEACFSEEQLRALNNYRQMLNDKKQARIQSEFRKALESAEKEEGLSRDVTTVWKLRVTSYKKKEKSALLSIWRP--SSDLSSLLTEGKRYRIYHLAVSKSKSKFERPSIQLTATKRTQYQQLPVSSETLLQVYQPRESLHFSRLSDPAFQPPCSEVDVVGVVVSVVKPIGLAPLVYLSDECLNLLVVKFGIDLNEDIKPRVLIAASNLQCQPESTSGVPTLFAGHFSIFSASPKEAYF-QEKVNNLKHAIENIDTFYKEAEKKLIHVLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -344373 for 4420 contacts (-77.9/contact) +
2D Compatibility (PS) -63562 + (NN) 18323 + (LL) 2036
1D Compatibility (HY) 2400 + (ID) 3350
Total energy: -388526.0 ( -87.90 by residue)
QMean score : 0.160
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