Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ
2FWI Chain:A ((25-168))
--VGIIMGSQSDWETMRHADALLTELEIPHETLIVSADRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRA--------------
General information:
TITO was launched using:
RESULT:
Template:
2FWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127960 for 1245 contacts (-102.8/contact) +
2D Compatibility (PS) -15380 + (NN) -4581 + (LL) 1676
1D Compatibility (HY) -15200 + (ID) 4200
Total energy: -165645.0 ( -133.05 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2FWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWI-query.scw
PDB file :
Tito_Scwrl_2FWI.pdb
: