Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN-----
1UMQ Chain:A ((22-81))
LAKGESLPPPPENPMSADRVRWEHIQRIYEMCDRNVSETARRLNMHRRTLQRILAKRSPR
General information:
TITO was launched using:
RESULT:
Template:
1UMQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 26839 for 258 contacts (104.0/contact) +
2D Compatibility (PS) -4958 + (NN) -2191 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 17790.0 ( 68.95 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_1UMQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UMQ-query.scw
PDB file :
Tito_Scwrl_1UMQ.pdb
: