Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV
1B9M Chain:A ((14-68))
--------------------------LQQKLFADPRRISLLKHIALSGSISQG-----AKDAG-ISYKSAWDAINEMNQLSE---------
General information:
TITO was launched using:
RESULT:
Template:
1B9M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -640 for 301 contacts (-2.1/contact) +
2D Compatibility (PS) -5257 + (NN) -624 + (LL) 4440
1D Compatibility (HY) 1600 + (ID) 200
Total energy: -681.0 ( -2.26 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_1B9M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B9M-query.scw
PDB file :
Tito_Scwrl_1B9M.pdb
: