Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
2VOC Chain:A ((2-102))
-AIVKATDQSFSAETSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNK--
General information:
TITO was launched using:
RESULT:
Template:
2VOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64437 for 749 contacts (-86.0/contact) +
2D Compatibility (PS) -11282 + (NN) -8218 + (LL) 428
1D Compatibility (HY) -11200 + (ID) 3050
Total energy: -97759.0 ( -130.52 by residue)
QMean score : 0.737
(partial model without unconserved sides chains):
PDB file :
Tito_2VOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VOC-query.scw
PDB file :
Tito_Scwrl_2VOC.pdb
: