Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
3TZC Chain:A ((13-249))
----KVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR----MRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV------------AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM-----DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY-
General information:
TITO was launched using:
RESULT:
Template:
3TZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117977 for 1803 contacts (-65.4/contact) +
2D Compatibility (PS) -23005 + (NN) -3060 + (LL) 1688
1D Compatibility (HY) -19200 + (ID) 5850
Total energy: -167404.0 ( -92.85 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3TZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZC-query.scw
PDB file :
Tito_Scwrl_3TZC.pdb
: