Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTR--VILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNEDKQILERYKIGLKKG
1P9P Chain:A ((7-247))
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLG-----------EGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFK------
General information:
TITO was launched using:
RESULT:
Template:
1P9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125174 for 1636 contacts (-76.5/contact) +
2D Compatibility (PS) -24737 + (NN) -9847 + (LL) 368
1D Compatibility (HY) -22800 + (ID) 5050
Total energy: -187240.0 ( -114.45 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1P9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9P-query.scw
PDB file :
Tito_Scwrl_1P9P.pdb
: