Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILAEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEKEPKLAIIAEIKSKSPTVNDLPE-RDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS
3T78 Chain:A ((43-246))
--------------------------------------VMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTL--DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLV-------------------
General information:
TITO was launched using:
RESULT:
Template:
3T78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119899 for 1717 contacts (-69.8/contact) +
2D Compatibility (PS) -21394 + (NN) -6818 + (LL) 4844
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -160017.0 ( -93.20 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3T78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T78-query.scw
PDB file :
Tito_Scwrl_3T78.pdb
: