Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
1R53 Chain:A ((238-298))
------------------------------------LEAMLAHAMLSIPASKGFEIGSGFQGVSVP-----------------
General information:
TITO was launched using:
RESULT:
Template:
1R53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9641 for 119 contacts (-81.0/contact) +
2D Compatibility (PS) -3039 + (NN) 651 + (LL) 3400
1D Compatibility (HY) -400 + (ID) 200
Total energy: -9229.0 ( -77.55 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_1R53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R53-query.scw
PDB file :
Tito_Scwrl_1R53.pdb
: