Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLP---FSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF |
1WQ7 Chain:A ((16-232)) | ---------------------------------------------------------------------------------------FQEITSTNEFAKTSYL--EEGTVIVADKQTMGHG------ESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDG-RIKWPNDVLVNYKKIAGVLVEGKG-----DKIVLGIGLNVNNKVPN-------GATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRV--KIL----GDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116014 for 1701 contacts (-68.2/contact) +
2D Compatibility (PS) -22279 + (NN) -8091 + (LL) 7372
1D Compatibility (HY) -20800 + (ID) 3450
Total energy: -163262.0 ( -95.98 by residue)
QMean score : 0.422
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