Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYKYLKLN---KTEDFAKLVDQTTLDLTYKADKGQC-VILDNEDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQIK
2FEO Chain:A ((8-222))
-----ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASED-ALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNMAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQ--
General information:
TITO was launched using:
RESULT:
Template:
2FEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59721 for 1664 contacts (-35.9/contact) +
2D Compatibility (PS) -22534 + (NN) -6790 + (LL) 940
1D Compatibility (HY) -14000 + (ID) 4200
Total energy: -106305.0 ( -63.89 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2FEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEO-query.scw
PDB file :
Tito_Scwrl_2FEO.pdb
: