Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
3HPW Chain:C ((11-31))
----------ENQEGMAEVARFIEMNGSFAD---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HPW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 862 for 75 contacts (11.5/contact) +
2D Compatibility (PS) -2273 + (NN) -1721 + (LL) 3088
1D Compatibility (HY) -1200 + (ID) 100
Total energy: -1344.0 ( -17.92 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3HPW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HPW-query.scw
PDB file :
Tito_Scwrl_3HPW.pdb
: