Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVEVYKGAQGKHNLKDYEETYNTFDWKDVEQAFSWSETGKMNMAYECIDRHVDQGLGDKIALNYKDEYRKESYTYKDMQRLSNKAANVLSEHAEVDKGDRVFIFMSRTPELYFALLGVLKIGAIVGPLFEAFMEKAVADRLENSEAKVLITNKALLPRV-PVDK-LPNLKKIVVVDEDVE-------DNYIDFISLMETASDEFD-IEWLKSDDGLILHYTSGSTGQPKGVLHVQQAMLVHYISGKYVLDLQEDDVYWCTADPGWVTGT------SYGIFAP--WLNGATNCIAGGRFSPEQWYSMIEDFKVTIWYTAPTALRMLMSAGDDIVEKYDLSSLRSILSVGEPLNPEVIKWAKKVYGLT-VLDTWWMTETGGHMIVNYPTMDVKLGSMGKPLPGIQAAIID-DAGNELPPNRMGNLAIKKGWPSMMYRIWKNPEKYKSYFIGD-WYVSGDSAYKDEDGYFWFQGRVDDVIMTAGERVGPFEVESKLVEHEAVAEAGIIGKPDPVRGEIIKAFVALRKGYEPTDELKEEIRLFVKEGLSAHAAPR-EIEFKDKLPKTRSGKI----MRRVLKAWELNLDAGDLSTME |
| 2D1R Chain:A ((41-542)) | -------------------------------------------------------------AIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDG-RIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHAR-------DPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLICGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKS--ELLNKYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIIT-PEGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVK--GPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVLESGKNMTE---KEVMDYVASQVSNAKRLRGGVRFVDEVPKGLTGKIDGRAIREILK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203603 for 4034 contacts (-50.5/contact) +
2D Compatibility (PS) -50729 + (NN) -18437 + (LL) 5544
1D Compatibility (HY) -29600 + (ID) 7150
Total energy: -303975.0 ( -75.35 by residue)
QMean score : 0.455
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