Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKW-KHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
| 1T69 Chain:A ((55-356)) | ------------------------------------------------RIVKPKVASMEEMATFHTDAYLQHLQKVSQ-----PDSIEYGLGYDCPAT-EGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF-ERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKC---LKYILQWQL--ATLILGGGGYNLANTA-RCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDR--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176546 for 2598 contacts (-68.0/contact) +
2D Compatibility (PS) -31745 + (NN) -12189 + (LL) 6256
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -235024.0 ( -90.46 by residue)
QMean score : 0.469
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