Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHKLAHTSFGIVGMFVNTCMVAKYVIINWEMFSMKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILLTLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV
4Q77 Chain:B ((10-139))
------------------------------------VNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILLTLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERP-----TVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV
General information:
TITO was launched using:
RESULT:
Template:
4Q77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63629 for 795 contacts (-80.0/contact) +
2D Compatibility (PS) -13371 + (NN) -2551 + (LL) 3820
1D Compatibility (HY) -20400 + (ID) 6250
Total energy: -102381.0 ( -128.78 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4Q77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q77-query.scw
PDB file :
Tito_Scwrl_4Q77.pdb
: