Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQDIISTIGDLVKWIIDTVNKFTKK
3TVJ Chain:B ((226-242))
------TKVINYIPWIENIISDF---
General information:
TITO was launched using:
RESULT:
Template:
3TVJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3426 for 59 contacts (-58.1/contact) +
2D Compatibility (PS) -1742 + (NN) 325 + (LL) 984
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -6409.0 ( -108.63 by residue)
QMean score : 0.162
(partial model without unconserved sides chains):
PDB file :
Tito_3TVJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TVJ-query.scw
PDB file :
Tito_Scwrl_3TVJ.pdb
: