Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHELK
3R38 Chain:A ((72-100))
---LSDVFTINEVLKYLNADVSFVNDEVTV---------------
General information:
TITO was launched using:
RESULT:
Template:
3R38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8732 for 121 contacts (-72.2/contact) +
2D Compatibility (PS) -2965 + (NN) -1543 + (LL) 1236
1D Compatibility (HY) -2400 + (ID) 100
Total energy: -14504.0 ( -119.87 by residue)
QMean score : 0.700
(partial model without unconserved sides chains):
PDB file :
Tito_3R38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R38-query.scw
PDB file :
Tito_Scwrl_3R38.pdb
: