Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYS----KDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK
4RV7 Chain:D ((20-168))
-------------------------------------------------------------------------------------------------------------YGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDVSEEELHKIL---------------
General information:
TITO was launched using:
RESULT:
Template:
4RV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127863 for 1151 contacts (-111.1/contact) +
2D Compatibility (PS) -15783 + (NN) -7174 + (LL) 11992
1D Compatibility (HY) -16800 + (ID) 4600
Total energy: -160228.0 ( -139.21 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_4RV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RV7-query.scw
PDB file :
Tito_Scwrl_4RV7.pdb
: