Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMPGLS------ETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
2L9P Chain:A ((2-157))
----TIEKKKNKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAIQ-APQMISYTIAEYLQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVKGK-TTVTSTST-FPTESAA---------QQAIDMGVETGMNSTLNQLEKLLNQKL--
General information:
TITO was launched using:
RESULT:
Template:
2L9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35368 for 1028 contacts (-34.4/contact) +
2D Compatibility (PS) -15602 + (NN) 906 + (LL) 1432
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -52782.0 ( -51.34 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_2L9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9P-query.scw
PDB file :
Tito_Scwrl_2L9P.pdb
: