Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINS--GFVKPNPNDYDFSK-LYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFL-AGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDL-YQIRW--NGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK |
| 3ROH Chain:A ((48-325)) | --------------------------------TNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTK-DPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGG--NGSFNYSKTISYTQKSYVSEVDKQ-NSKSVKWGVKANEFVT----PDGKKSAHDRY---LFVQSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTGIY-AERKHNAFVNRNFVVRYEVNWKTHEIKV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ROH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48763 for 2097 contacts (-23.3/contact) +
2D Compatibility (PS) -28481 + (NN) -6568 + (LL) 2576
1D Compatibility (HY) -22400 + (ID) 4600
Total energy: -108236.0 ( -51.61 by residue)
QMean score : 0.329
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