Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGR-------------HAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHI----PFKNVCQAVVYISGQKKGDVVTHFRDYQLRIQDN---ALTRQFRDLV---QDSQIDIVLEANIQQAIWYKLLVNLGINSITAL--GRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVD-TIMTIYQGYPDEMGTSMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM |
| 3I83 Chain:A ((3-299)) | -LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYT--FRPAA--VVRSAAELETKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEG--FVRAIMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPYK--TSMLVDFEAGQPMETEVILGNAVRAGRRTRVAIPHLESVYALMK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193907 for 2222 contacts (-87.3/contact) +
2D Compatibility (PS) -29033 + (NN) -4836 + (LL) 1332
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -243444.0 ( -109.56 by residue)
QMean score : 0.467
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