Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTTKPMSTQTSNTTTTEPASTNETPQPTAIKNQATAAKMQDQTVPQEANSQVDNKTTNDANSIATNSELKNSQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTASNFKLEKTTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKLPDSLTGNGDVDYSNSNNTMPIADIKSTNGDVVAKATYD----ILTKTYTFVFTDYVNNKENINGQFSLPLFTDRAKAPKSGTYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQ-RVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIKFG---DITKTYVVLVEGHYDNTGKN---LKTQVIQENVDPVTNRDYSIFGWNNENVVRYGGGSADG-DSAVNPKDPTPGPPVDPEPSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA |
| 2VR3 Chain:A ((31-329)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNLNG------VTSTAKVPPIMA----VLANGVIDSDGNVI-----YTFTDYVNTKCDVKATLTMPAYIDPENVKKTGNVTLATGIGSTTANKTVLVDYEK----YGKFYNLSIKGTIDQIDKTN--NTYRQTIYVNPSGDNVIAPV---LTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNP-----EDVTNSV--NITFPNPNQYKVEF-PDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYN----SNIIWRSMSWDNEVAFNNGSGSGDGIDCPVVP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66309 for 2141 contacts (-31.0/contact) +
2D Compatibility (PS) -30026 + (NN) -10888 + (LL) 1740
1D Compatibility (HY) -20000 + (ID) 4200
Total energy: -129683.0 ( -60.57 by residue)
QMean score : 0.401
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