Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKQSQDFLEKLRVELLFRGKTEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLT-TGLYKYITLYFSFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIVVFLWMIFGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIVICILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED |
4U8V Chain:A ((328-410)) | ----------------------------------------------DTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVL-LGTFAVLAAFGFSINTLTMFGMVLAIGLLVNDAI------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72084 for 472 contacts (-152.7/contact) +
2D Compatibility (PS) -7977 + (NN) 3957 + (LL) 17588
1D Compatibility (HY) -9200 + (ID) 1100
Total energy: -68816.0 ( -145.80 by residue)
QMean score : 0.411
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