Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFMIFILAVGQKQRNAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYY--INPLVS--------ILLALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAISSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAITAIPLILFSAGAKRIPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLY------SLSQYIKLKKHPVAKTL |
| 3W4S Chain:A ((1-273)) | -------MKCLVVGHVVRDIVKKGNKVLERLGGGAYYSALAL--SRFCDVEILTSFSNLPEEWIKELESM------------AKLQVVPSETTTTYELTYLDGNRRRLKLLERASPIEELPDGEYDVLLMNPVAREVPPALVTSALKKFPFVAVDIQGFIRSSSP------------GEIQYQPIDGSFLKGVK-----------ILHADLGEYQYLQGFSPEFVDVLLLSNGPEPGKAFL-HGREYTFEPVHVGVDESTGAGDVFLGAFTGFYSQCPFVQALKRAAAFTALFLKNRSVDFSMDDVNELAMKVEVKRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -357467 for 2200 contacts (-162.5/contact) +
2D Compatibility (PS) -26813 + (NN) 1711 + (LL) 4680
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -380689.0 ( -173.04 by residue)
QMean score : 0.245
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